GitHub - Cibiv/NextGenMap: NextGenMap is a flexible highly sensitive short read mapping tool that handles much higher mismatch rates than comparable algorithms while still outperforming them in terms of runtime. This allows analysing large scale datasets even with increased SNP rates or higher error rates (e.g. caused by specialized experimental protocols) and avoids biases caused by highly variable regions in the genome.

Branches Tags

Name		Name	Last commit message	Last commit date
Latest commit History 459 Commits
docker		docker
include		include
lib		lib
opencl-sdk		opencl-sdk
src		src
utils		utils
.gitignore		.gitignore
CMakeLists.txt		CMakeLists.txt
INSTALL		INSTALL
LICENSE		LICENSE
README		README

Repository files navigation

Please see our github wiki for more information (https://github.com/Cibiv/NextGenMap/wiki)

About

NextGenMap is a flexible highly sensitive short read mapping tool that handles much higher mismatch rates than comparable algorithms while still outperforming them in terms of runtime. This allows analysing large scale datasets even with increased SNP rates or higher error rates (e.g. caused by specialized experimental protocols) and avoids biases…

c-plus-plus-11 next-generation-sequencing opencl short-read-mapper