Mark Craven's Research Lab
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subnetwork_inference
subnetwork_inference PublicSource code and data files for subnetwork inference paper
Python 2
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generalizedtrees
generalizedtrees PublicForked from sverchkov/generalizedtrees
Library for tree models: decision trees, model trees, mimic models, etc.
Python 2
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graph-molecular-phenotype-prediction
graph-molecular-phenotype-prediction PublicCode accompanying the paper "A graph-based learning approach to predict the effects of gene perturbations on molecular phenotypes" by Jin et al.
Repositories
- igvf-cvfg-biobank Public
Python package for performing biobank validation of variant classifications in the All of Us Workbench.
- esm-1v-workflow Public
Workflow and supporting code for evaluating every amino acid human protein substitution using ESM-1v.
- graph-molecular-phenotype-prediction Public
Code accompanying the paper "A graph-based learning approach to predict the effects of gene perturbations on molecular phenotypes" by Jin et al.
- stringdb_alias Public
A python package for working with string-db.org aliases (gene and protein ID mapping).
- generalizedtrees Public Forked from sverchkov/generalizedtrees
Library for tree models: decision trees, model trees, mimic models, etc.
- SARS-CoV-2-Analysis Public
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