Update cogent3 requirement from >=2026.7.30a0 to >=2026.8.26

[dependabot]

Updates the requirements on cogent3 to permit the latest version.

Changelog

Sourced from cogent3's changelog.

Changes in release "2026.8.26"

Minor enhancement update.

Contributors

• @​GavinHuttley

Enhancements

• Added Sequence.set_repr_policy(), controlling num_pos and wrap for both the text and HTML representations.
• set_repr_policy() is now available on Alignment, and the text representations of SequenceCollection and Alignment honour num_pos rather than a hardcoded limit.
• A collection's repr policy now propagates to its member sequences.

Documentation

• Changed from Sphinx and restructured text to Quartodoc and their dialect of markdown. While I personally love rst, it's clear Markdown has won the lightweight markup battle and, more critically, is the lingua franca of AI agents.

Changes in release "2026.7.30a0"

Minor enhancement and bug fix release.

Contributors

• @​GavinHuttley

Enhancements

• New cogent3.available_seq_formats displays supported sequence formats and their suffixes.
• Table.write now accepts with_title and with_legend arguments for suppressing the table title and legend. These are also supported by Table.to_string, Table.to_rst and Table.to_latex.

Bug fixes

• Table methods now handle empty tables gracefully. to_markdown, to_latex and sorted(reverse=...) no longer raise on a table with a header and no rows, and the string output methods (to_csv, to_tsv, to_markdown, to_string, to_latex, to_rst), count_unique and transposed no longer raise on a table with no columns. Fixes #721.

Documentation

... (truncated)

Commits

• fb97813 Merge pull request #2719 from GavinHuttley/develop
• 455d9e1 DEV: reduce ruff version to fit within "newer" limits
• faf5845 DEV: bump version to 2026.8.26
• 5ae6c0c Merge pull request #2718 from GavinHuttley/develop
• 32d1580 BUG: set_repr_policy no longer partially mutates on invalid input
• 1631932 DEV: drop griffe to <2 for compatibility with quartodoc
• 10708ed ENH: collection repr policy propagates to member sequences
• 93fbdc6 ENH: collection text repr honours the repr policy
• 35c4ebb ENH: add Sequence.set_repr_policy(), closes #2015
• 18dd1a6 Merge pull request #2717 from GavinHuttley/develop
• Additional commits viewable in compare view

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[codacy-production]

Up to standards ✅

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