CODE: update pre-commit hooks

[stevengeorge128]

Updated the pre-commit hook versions according to the recent Slack discussion and applied the resulting formatting/linting changes.

One remaining issue is a formatting conflict between black and docformatter affecting the following files:

• src/diffpy/pdfgui/gui/tooltips.py
• src/diffpy/pdfgui/control/fitdataset.py
• src/diffpy/pdfgui/control/fitstructure.py

In each case, the conflict is the same: black and docformatter repeatedly move the comma following a multiline triple-quoted string, preventing pre-commit from passing.

[stevengeorge128]

@stevenhua0320, ready to review

[stevenhua0320]

You could remove the comma to make it not conflict for the pre-commit hook. The purpose now is to make the pre-commit workflow passing. Also, per our convention, we would make the title with chore: ... More details about how we name these is documented in the scikit-package webpage.