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feat: sample_type update#182

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mkirk111 wants to merge 4 commits into
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sample_type-update
Open

feat: sample_type update#182
mkirk111 wants to merge 4 commits into
mainfrom
sample_type-update

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update to metadata for new sample_type
GG4K FFPE

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Pull request overview

Updates St. Jude Cloud Genomics Platform documentation to reflect a new FFPE-related dataset/sample type metadata.

Changes:

  • Expands allowed values for sample_type in the metadata specification.
  • Adds a new PCGP dataset entry/section for “G4K FFPE” (G4KF) and updates dataset tables/TOC accordingly.
  • Updates sample counts for selected datasets in the “List of Data Sets” table.

Reviewed changes

Copilot reviewed 2 out of 2 changed files in this pull request and generated 7 comments.

File Description
content/3.genomics-platform/2.about-our-data/3.metadata-and-clinical-information.md Updates the documented sample_type enumerated values.
content/3.genomics-platform/2.about-our-data/1.data-sets-and-data-access-units.md Adds G4KF (G4K FFPE) to the PCGP dataset list/table and adds a new dataset section.

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Comment thread content/3.genomics-platform/2.about-our-data/1.data-sets-and-data-access-units.md Outdated
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Comment thread content/3.genomics-platform/2.about-our-data/1.data-sets-and-data-access-units.md Outdated
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mkirk111 and others added 3 commits June 26, 2026 17:26
Co-authored-by: Copilot Autofix powered by AI <175728472+Copilot@users.noreply.github.com>
Co-authored-by: Copilot Autofix powered by AI <175728472+Copilot@users.noreply.github.com>
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2 participants