Add telomerehunter2 module - #12917
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PR checklist
Closes issue number #12916
This PR adds a new
telomerehunter2module.TelomereHunter2 estimates telomere content and telomeric variant repeats from indexed BAM/CRAM sequencing data. It is a Python 3 implementation and extension of the original TelomereHunter workflow.
The module takes a coordinate-sorted BAM file, BAM index and optional chromosome banding file, then emits:
Software requirements: