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New module: tobias/bindetect - #12925

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PFRoux wants to merge 1 commit into
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PFRoux:add-tobias-bindetect
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New module: tobias/bindetect#12925
PFRoux wants to merge 1 commit into
nf-core:masterfrom
PFRoux:add-tobias-bindetect

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@PFRoux

@PFRoux PFRoux commented Sep 10, 2026

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PR checklist

Closes #12924

Design

BINDetect is intentionally separate from TOBIAS ATACorrect and ScoreBigwig. It accepts one or more footprint score BigWigs and emits reusable global and motif-specific transcription factor binding results. The three commands can be composed in a TOBIAS footprinting subworkflow.

Local validation

  • nf-test Docker stub test: passed.
  • nf-core modules lint tobias/bindetect: 51 checks passed; no warnings or failures.
  • The Biocontainers image quay.io/biocontainers/tobias:0.17.5--py310h3479294_0 was verified locally.

Conda and Singularity test profiles are left to the automated CI matrix.

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New module: tobias/bindetect

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